SoftGenetics - Software PowerTools for Genetic Analysis

 

 

 

 

 

de novo Assembly of NGS reads

NextGENe software includes multiple, platform specific assembly tools for de novo assembly of short sequencing reads from all major NGS platforms from Illumina and Ion Torrent. NextGENe software's Windows based operation provides a biologist friendly script-free point and click operation. The software includes specialized assembly tools for the paired end Illumina sequencing and a unique “flow based” assembler, Floton™ for the Ion Torrent systems.


Single end or paired data can be used as input. Multiple assembly methods are available including a de Bruijn assembly method, which is similar to the Velvet assembly tool.


NextGENe software also includes the unique Condensation Tool™ which can be used prior to assembly to correct sequencing errors and elongate reads to allow improved assembly results. This patent-pending technology is not available is other programs like CLC Genomics Workbench, Lasergene's SeqMan Pro, or in academic tools like Velvet, ABySS, ALLPATHS & VCAKE.

For More Information Review or Download Application notes:
Paired End Assembly of MiSeq data
Assembly of Ion PGM reads with the Floton assembler
De novo Assembly Application Note
Paired Read Assembly Application Note
De Bruijn Assembly Application Note
Condensation Application Note
Using NextGENe software's Pipeline Automation Tool

 

View live webinars
Floton Assembly of Ion PGM Data (View) (view on )
NextGENe Stepwise Assembly of MiSeq PE Data (View) (view on )

 

Pricing & Trial Version:
Request 30-day trial/Price Quote

 

Reference Material:
Download/View NextGENe® Brochure
NextGENe User Manual
Annotated Reference Genomes

 

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SoftGenetics - Software PowerTools for Genetic Analysis

 

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SoftGenetics - Software PowerTools for Genetic Analysis

100 Oakwood Avenue | Suite 350 | State College, PA 16803 | USA
Phone: 814-237-9340 or 888-791-1270
Email: info@softgenetics.com

 

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