Specifying NextGENe Process Options
You use process options in NextGENe to specify the following:
• Whether to save local or network data in a temporary local folder.
• Whether to save post-processing outputs in a location other than the project output folder.
• View the location of the Template root directory, which is the directory in which all NextGENe AutoRun templates are saved.
• Set the location of the Geneticist Assistant installation directory.
• Whether to save the reference annotation files in the project folder, or simply link to the information, which greatly reduces the size of the output folder.
For some of these process options, you must
specify a value, while for other options, default values are provided. Typically, these default values are the preferred values; however, if needed, you can edit some of these values. You can also use the options that are available to manage your references for your NextGENe projects.