NextGENe Online Help : Sequence Condensation Tool : Overview of the NextGENe Sequence Condensation Tool
Overview of the NextGENe Sequence Condensation Tool
The NextGENe Condensation Tool uses depth of coverage to correct sequence reads that contain instrument base calling errors and to elongate reads, while merging identical reads or maintaining read number as necessary for your project. Three methods are available for condensation—Consolidation, Elongation, and Error Correction. All three of the methods correct low frequency instrument errors by generating a consensus sequence from clustered reads. The type of data that you are analyzing—Illumina, SOLiD System, Ion Torrent, or Roche/454— determines the available methods.
 
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If you load multiple sample files for analysis, all the data is evaluated as whole, not by individual sample files.