Generating a Standard Report
To generate an output file of the data after a run is successfully completed, you
generate a
standard report. A standard report includes all the data that is displayed in a selected pane or panes on a data tab, for example, the Samples pane on the Run tab. Six different standard reports are available in Geneticist Assistant:
• Run report—You generate the standard Run report from the Run tab. The report includes all the information that is displayed in the Samples pane and/or the Run's Status Changes pane on the tab.
• Coverage Regions report—You generate the Coverage Regions report from the Coverage Regions tab. The report includes all the information that is displayed on the tab.
• Panel Statistics reports—You generate a standard Panel Statistics report from the Panel Statistics tab. The report includes all the information that is displayed in any of the following four sub-tabs that you specify—Coverage Regions, Samples, Variants, and/or Patients.
• Sample report—You generate a standard Sample report from the Sample tab. The report includes all the information that is displayed in the panes that you specify— the Variants pane on the Sample Variant Data sub-tab and/or any of the four panes (Status Changes, Patient, Related Patients, or Comments) on the Sample Data sub-tab.
• Variant report—You generate a standard Variant report from the Variant tab. The report includes all the information that is displayed in any of the following five panes that you specify—Variant, Pathogenicity Changes, Artifact Changes, Variant Changes, Variant Comments, Supporting Information, and/or Associated Samples.
• Action List report—You generate the Action List report from the Action List tab. The report includes all the information that is displayed in the panes that you specify—the Variants pane and/or the Coverage Regions pane.