NextGENe Online Help : The NextGENe AutoRun Tool
The NextGENe AutoRun Tool
NextGENe provides many tools for optimizing input data and exporting and analyzing results. The NextGENe AutoRun tool is a multi-functional tool that you can use for the following purposes:
To carry out the batch analysis of multiple projects, where each project is referred to as a job, and jobs are contained in a single job file.
To carry out the batch processing of previously processed sequence alignment projects and export outputs of your choosing.
To carry out a secondary batch analysis of multiple projects.
To create and modify templates for facilitating job setup in the NextGENe AutoRun tool, including jobs for analysis of data for RainDance Thunderbolts panels.
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All other NextGENe tools, with the exception of the NextGENe Format Conversion tool and the NextGENe Sensitive Aneuploidy Detection tool, are discussed in detail in NextGENe Tools. The NextGENe Format Conversion tool is discussed in The NextGENe Format Conversion Tool. The NextGENe Sensitive Aneuploidy Detection tool is discussed in The NextGENe Sensitive Aneuploidy Detection Tool.