Output tab
 
* 
The settings on this tab are applicable only for post-processing.
 
Setting
Description
Save SIFT report
Saves the Mutation Report as a SIFT report, which can be used in the third party SIFT tool.
Save VCF report (filtered)
Saves the Mutation Report in a format that adheres to Variant Call Format (VCF) specifications. The report contains only those variants that passed the Mutation Report Filter settings.
Note: Also available as a Mutation report function. See Sequence Alignment Project Mutation Report Functions.
Save consensus sequence
Saves the consensus sequence to a .fasta file. To specify the settings for the saved file, click Edit Settings. See Save consensus sequence.
Save SNP consensus sequence
Saves the SNP consensus sequence to a .fasta file. To specify the settings for the saved file, click Edit Settings. See Save SNP consensus sequence.