To save project settings
When you save a project settings configuration file, the file includes the settings for all selected steps in the Project Wizard, which can include sequence condensation, sequence assembly or sequence alignment, and post-processing.
1. Open the Project Wizard.
2. Select the application type, and confirm that your current settings for the data analysis steps are as you want them.
3. Click Save Settings.
The Save As dialog box opens. By default, the file type is set to Configuration File (.ini).
4. Enter a filename, browse to the location in which you are saving the file, and then click Save.