Menu Option | Description |
|---|---|
Load Project | Load an alignment project for viewing and analyzing. |
Save Project | Save the currently loaded alignment project. |
Save Optional Reference Info | If your Process Options are set to link the reference annotation information to a project instead of exporting it to the project output folder (see Specifying NextGENe Process Options), then you can use this option to save the information (Annotation.gbk and dbsnp.txt) to the output folder. See Save Optional Reference Info. Tip: This option is useful in the event that a project needs to be copied to another computer, and you must ensure that all the project output information is copied. |
Export | • Bed file – Creates a BED file for a specified input sequence range. See Exported BED file. • Gap.fasta – Available only for very small projects (reference < 10Mbp). See Exported Gap.fasta file. • SAM/BAM Output – To export the NextGENe project file to a format (SAM or BAM) that other alignment viewers can use. See SAM/BAM Output. • Export Project – Saves the entire project folder to a location of your choice, for example, a network folder. See Export Project. |
Show Open Reports | Brings any minimized alignment report to the front of the application display again. |