Option | Comment |
|---|---|
Add Mutation | Click this option to open the Add New Mutation dialog box and specify a variant call for a position. Note: To view a manually added variant in the Mutation report, you must select “Added manually” on the Filters tab on the Mutation Report Settings dialog box. The Comment column displays “Added Manually” for the variant. See “Filter tab, Annotation sub-tab. |
Note: When using the Save Consensus Sequence function from the Mutation report menu, the first three functions listed below affect how the consensus sequence is output.See Save consensus sequence. | |
Automatic Add Consensus Break Point | Click this option to automatically add consensus sequence breakpoints at positions where there is no coverage. |
Add Consensus Break Point | Click this option to manually add a consensus breakpoint at a selected position. |
Delete Consensus Break Point | Click this option to remove a consensus breakpoint at a selected position. |
Go to Position in Mutation Report | Click this option to go to the position in the Mutation report. See Sequence Alignment Project Mutation Report. |
Tracks | Displays the available tracks (panes) in the Alignment viewer. Click on a track (pane) as needed to toggle its display on and off. Note: Tracks is also available as a context menu option for the Position pane, the Translation pane, the Track panes, and the Sequence pane. |