NextGENeLR Software is an effective and easy-to-use resource for the analysis of long read sequencing data such as data from Pacific Biosciences RS, RSII, Sequel, and Sequel II systems, as well as Oxford Nanopore MinION.
NextGENeLR can be used for structural variation detection, STR expansion analysis, and whole genome mitochondrial DNA analysis, including low frequency SNV and indel detection, structural variation detection, and mitochondrial haplotyping, with support for mixed samples. Analyses can be set up using an intuitive interface which facilitates batch processing of a number of samples. Recent enhancements to instruments such as PACBIO® and Oxford Nanopore Technologies have improved accuracy to as much as 98%.
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