Geneticist Assistant includes the BED File Builder Tool which can be used to create custom BED files for any panel. First, simply enter the name of each gene to be included or load a text file with multiple genes. Then, choose the desired transcript, indicate the type of regions to be included and optionally choose to include a set number of bases at either end of each region. The Phenotype field can also be used to search for genes of interest by linking to the Human Phenotype Ontology database to locate genes associated with a particular phenotype.
BED File Builder Tool: Build your own custom BED file based on your own list of genes or search for genes based on phenotype.
The regions can be saved to a BED file and/or directly imported as a panel for use in Geneticist Assistant.