SoftGenetics - Software PowerTools for Genetic Analysis

NextGENe software is the perfect analytical partner for the analysis of desktop sequencing data produced by Illumina® iSeq, Miniseq, MiSeq, NextSeq, HiSeq, and NovaSeq systems, Ion Torrent Ion GeneStudio S5, PGM, and Proton systems as well as other platforms. NextGENe software runs on a Windows® Operating System, which provides a biologist-friendly ‘point & click’ interface. It does not require scripting or other bioinformatics support, which are often required when using programs such as CLC Genomics Workbench, Lasergene's SeqMan Pro, as well as academic software such as MAQ & SOAP, Top Hat, BWA & Bowtie.

NextGENe software employs unique platform-specific technologies in one free-standing multi-application package. NextGENe software contains analysis modules for:

SNP/Indel detection
- Germline
- Somatic
- Exome Capture, Whole Exome Sequencing (WES)
- Whole Genome Sequencing (WGS)
Structural Variant Analysis (including fusion gene detection)
Family-based and Trio comparisons
Tumor-normal comparisons
Copy Number Variation (CNV) detection and alternative to MLPA-like screening
de novo assembly
Transcriptome; Alternative Splicing Analysis & Transcript Expression levels
ChIP-Seq, Digital Gene Expression (DGE), miRNA Analysis & Quantification & Metagenomicss

NextGENe software is designed in a biologist friendly Windows® environment significantly reducing the need for additional bioinformatics resources and costs. NextGENe software utilizes low cost 64-bit Windows OS based hardware. (Click here for suggested hardware configuration)

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Reference Material:

NextGENe User Manual
Annotated Reference Genomes